CORC

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CORC

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A New Context Tree Inference Algorithm for Variable Length Markov Chain Model with Applications to Biological Sequence Analyses 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2022, 页码: 18
作者:  An, Shaokun;  Ren, Jie;  Sun, Fengzhu;  Wan, Lin
收藏  |  浏览/下载：13/0  |  提交时间：2022/06/21
Confidence intervals for Markov chain transition probabilities based on next generation sequencing reads data 期刊论文
QUANTITATIVE BIOLOGY, 2020, 卷号: 8, 期号: 2, 页码: 143-154
作者:  Wan, Lin;  Kang, Xin;  Ren, Jie;  Sun, Fengzhu
收藏  |  浏览/下载：22/0  |  提交时间：2021/01/14
Benchmarking of alignment-free sequence comparison methods 期刊论文
GENOME BIOLOGY, 2019, 卷号: 20
作者:  Tang, Kujin;  Dencker, Thomas;  Lau, Anna Katharina;  Roehling, Sophie;  Choi, Jae Jin
收藏  |  浏览/下载：15/0  |  提交时间：2019/12/05
NetGO: improving large-scale protein function prediction with massive network information 期刊论文
NUCLEIC ACIDS RESEARCH, 2019, 卷号: 47, 期号: W1
作者:  Xiong, Yi;  Huang, Xiaodi;  Sun, Fengzhu;  Mamitsuka, Hiroshi;  Zhu, Shanfeng
收藏  |  浏览/下载：10/0  |  提交时间：2019/12/05
Statistical significance approximation for local similarity analysis of dependent time series data 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20
作者:  Zhang, Fang;  Sun, Fengzhu;  Luan, Yihui
收藏  |  浏览/下载：12/0  |  提交时间：2019/12/05
Statistical significance approximation for local similarity analysis of dependent time series data 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1
作者:  Zhang, Fang;  Sun, Fengzhu;  Luan, Yihui
收藏  |  浏览/下载：2/0  |  提交时间：2019/12/11
Alignment-free genome comparison enables accurate geographic sourcing of white oak DNA 期刊论文
BMC GENOMICS, 2018, 卷号: 19
作者:  Tang, Kujin;  Ren, Jie;  Cronn, Richard;  Erickson, David L.;  Milligan, Brook G.
收藏  |  浏览/下载：5/0  |  提交时间：2019/12/05
GOLabeler: improving sequence-based large-scale protein function prediction by learning to rank 期刊论文
BIOINFORMATICS, 2018, 卷号: 34, 期号: 14
作者:  You, Ronghui;  Zhang, Zihan;  Xiong, Yi;  Sun, Fengzhu;  Mamitsuka, Hiroshi
收藏  |  浏览/下载：2/0  |  提交时间：2019/12/05
Deep sequencing of HBV pre-S region reveals high heterogeneity of HBV genotypes and associations of word pattern frequencies with HCC 期刊论文
PLOS GENETICS, 2018, 卷号: 14, 期号: 2
作者:  Bai, Xin;  Jia, Jian-an;  Fang, Meng;  Chen, Shipeng;  Liang, Xiaotao
收藏  |  浏览/下载：5/0  |  提交时间：2019/12/05
COCACOLA: binning metagenomic contigs using sequence COmposition, read CoverAge, CO-alignment and paired-end read LinkAge 期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 6
作者:  Lu, Yang Young;  Chen, Ting;  Fuhrman, Jed A.;  Sun, Fengzhu
收藏  |  浏览/下载：8/0  |  提交时间：2019/12/05

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