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理论物理研究所 [5]
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烟台海岸带研究所 [1]
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期刊论文 [8]
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学科主题:Biochemistry & Molecular Biology
学科主题:Mathematical & Computational Biology
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ProALIGN: Directly Learning Alignments for Protein Structure Prediction via Exploiting Context-Specific Alignment Motifs
期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2022
作者:
Kong, Lupeng
;
Ju, Fusong
;
Zheng, Wei-mou
;
Zhu, Jianwei
;
Sun, Shiwei
收藏
  |  
浏览/下载:8/0
  |  
提交时间:2023/01/16
SERVER
Seq-SetNet: directly exploiting multiple sequence alignment for protein secondary structure prediction
期刊论文
BIOINFORMATICS, 2022, 卷号: 38, 期号: 4, 页码: 990-996
作者:
Ju, Fusong
;
Zhu, Jianwei
;
Zhang, Qi
;
Wei, Guozheng
;
Sun, Shiwei
收藏
  |  
浏览/下载:12/0
  |  
提交时间:2023/01/16
RECOGNITION
FRAGMENTS
FOLD
Extended mining of the oil biosynthesis pathway in biofuel plant Jatropha curcas by combined analysis of transcriptome and gene interactome data
期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: SUPPL 6, 页码: -
作者:
Zhang, Xuan
;
Li, Jing
;
Pan, Bang-Zhen
;
Chen, Wen
;
Chen, Maosheng
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  |  
浏览/下载:18/0
  |  
提交时间:2021/09/08
Extended mining
Oil biosynthesis
Jatropha curcas
Transcriptome
Gene interactome
Co-emergence of multi-scale cortical activities of irregular firing, oscillations and avalanches achieves cost-efficient information capacity
期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2017, 卷号: 13, 期号: 2, 页码: e1005384
作者:
Yang, DP (reprint author), Univ Sydney, Sch Phys, Sydney, NSW, Australia.
;
Yang, DP
;
Zhou, HJ
;
Zhou, CS
;
Zhou, CS (reprint author), Hong Kong Baptist Univ, Dept Phys, Kowloon Tong, Hong Kong, Peoples R China.
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  |  
浏览/下载:23/0
  |  
提交时间:2017/12/21
Improving prediction of burial state of residues by exploiting correlation among residues
期刊论文
BMC BIOINFORMATICS, 2017, 卷号: 18, 页码: 70
作者:
Gong, HE
;
Zhang, HC
;
Zhu, JW
;
Wang, C
;
Sun, SW
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  |  
浏览/下载:31/0
  |  
提交时间:2017/12/21
Protein Structure
Burial States Of Residue
Conditional Random Field
Residue Correlation
NeBcon: protein contact map prediction using neural network training coupled with naiive Bayes classifiers
期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 15, 页码: 2296-2306
作者:
Wang, YT
;
Zhang, Y
;
Zhang, Y (reprint author), Univ Michigan, Dept Computat Med & Bioinformat, Ann Arbor, MI 48109 USA.
;
Zhang, Y (reprint author), Univ Michigan, Dept Biol Chem, Ann Arbor, MI 48109 USA.
;
He, BJ
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浏览/下载:46/0
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提交时间:2017/12/21
Analysis of a Gene Regulatory Cascade Mediating Circadian Rhythm in Zebrafish
期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2013, 卷号: 9, 期号: 2, 页码: -e1002940
作者:
Du, JL
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浏览/下载:18/0
  |  
提交时间:2013/06/04
TRANSCRIPTION FACTOR
CLOCK
EXPRESSION
LIGHT
REVEALS
NEUROSPORA
PATHWAYS
CELLS
MOUSE
CRX
Towards a System Level Understanding of Non-Model Organisms Sampled from the Environment: A Network Biology Approach
期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2011, 卷号: 7, 期号: 8, 页码: e1002126
作者:
Williams, Tim D.
;
Turan, Nil
;
Diab, Amer M.
;
Wu, Huifeng
;
Mackenzie, Carolynn
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  |  
浏览/下载:12/0
  |  
提交时间:2011/11/11
Flounder Platichthys-flesus
Histopathological Biomarkers
Pleuronectes-platessa
Endocrine Disruption
Gene-expression
Liver Fibrosis
Marine Fish
Receptor
Microarray
Proteasome
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