BRANT: A Versatile and Extendable Resting-State fMRI Toolkit

doi:10.3389/fninf.2018.00052

	BRANT: A Versatile and Extendable Resting-State fMRI Toolkit
	Xu, Kaibin1,2,3,4 ; Liu, Yong1,2,5,6 ; Zhan, Yafeng 1,7; Ren, Jiaji 1,2,5; Jiang, Tianzi1,2,6,8,9
刊名	FRONTIERS IN NEUROINFORMATICS
	2018-09-03
卷号	12
关键词	Brant Resting-state Fmri Code-generated Gui Preprocessing Visualization
DOI	10.3389/fninf.2018.00052
文献子类	Article
英文摘要	Data processing toolboxes for resting-state functional MRI (rs-fMRI) have provided us with a variety of functions and user friendly graphic user interfaces (GUIs). However, many toolboxes only cover a certain range of functions, and use exclusively designed GUIs. To facilitate data processing and alleviate the burden of manually drawing GUIs, we have developed a versatile and extendable MATLAB-based toolbox, BRANT (BRAinNetome fmri Toolkit), with a wide range of rs-fMRI data processing functions and code-generated GUIs. During the implementation, we have also empowered the toolbox with parallel computing techniques, efficient file handling methods for compressed file format, and one-line scripting. In BRANT, users can find rs-fMRI batch processing functions for preprocessing, brain spontaneous activity analysis, functional connectivity analysis, complex network analysis, statistical analysis, and results visualization, while developers can quickly publish scripts with code-generated GUIs.
WOS关键词	MILD COGNITIVE IMPAIRMENT ; INTRINSIC FUNCTIONAL CONNECTIVITY ; HUMAN CONNECTOME PROJECT ; FALSE DISCOVERY RATE ; ALZHEIMERS-DISEASE ; MOTION ARTIFACT ; CORTICAL NETWORKS ; CEREBRAL-CORTEX ; BRAIN NETWORKS ; GLOBAL SIGNAL
WOS研究方向	Mathematical & Computational Biology ; Neurosciences & Neurology
语种	英语
WOS记录号	WOS:000443504200001
资助机构	National Key R&D Program of China(2016YFC1305904) ; National Natural Science Foundation of China(81571062 ; Strategic Priority Research Program of Chinese Academy of Science(XDBS1020200) ; Youth Innovation Promotion Association CAS(2014119) ; 81471120)
内容类型	期刊论文
源URL	[http://ir.ia.ac.cn/handle/173211/21823]
专题	自动化研究所_脑网络组研究中心
作者单位	1.Chinese Acad Sci, Brainnetome Ctr, Inst Automat, Beijing, Peoples R China 2.Chinese Acad Sci, Natl Lab Pattern Recognit, Inst Automat, Beijing, Peoples R China 3.Sinodanish Ctr Educ & Res, Beijing, Peoples R China 4.Univ Chinese Acad Sci, Sinodanish Coll, Beijing, Peoples R China 5.Univ Chinese Acad Sci, Sch Artificial Intelligence, Beijing, Peoples R China 6.Chinese Acad Sci, Inst Automat, CAS Ctr Excellence Brain Sci, Beijing, Peoples R China 7.Southern Med Univ, Sch Biomed Engn, Guangzhou, Guangdong, Peoples R China 8.Univ Elect Sci & Technol China, Sch Life Sci & Technol, Minist Educ, Key Lab NeuroInformat, Chengdu, Sichuan, Peoples R China 9.Univ Queensland, Queensland Brain Inst, Brisbane, Qld, Australia
推荐引用方式 GB/T 7714	Xu, Kaibin,Liu, Yong,Zhan, Yafeng,et al. BRANT: A Versatile and Extendable Resting-State fMRI Toolkit[J]. FRONTIERS IN NEUROINFORMATICS,2018,12.
APA	Xu, Kaibin,Liu, Yong,Zhan, Yafeng,Ren, Jiaji,&Jiang, Tianzi.(2018).BRANT: A Versatile and Extendable Resting-State fMRI Toolkit.FRONTIERS IN NEUROINFORMATICS,12.
MLA	Xu, Kaibin,et al."BRANT: A Versatile and Extendable Resting-State fMRI Toolkit".FRONTIERS IN NEUROINFORMATICS 12(2018).