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Extended mining of the oil biosynthesis pathway in biofuel plant Jatropha curcas by combined analysis of transcriptome and gene interactome data
期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: SUPPL 6, 页码: -
作者:
Zhang, Xuan
;
Li, Jing
;
Pan, Bang-Zhen
;
Chen, Wen
;
Chen, Maosheng
收藏
  |  
浏览/下载:18/0
  |  
提交时间:2021/09/08
Extended mining
Oil biosynthesis
Jatropha curcas
Transcriptome
Gene interactome
Interactome-based abiotic and biotic impacts on biodiversity of plankton communities in disturbed wetlands
期刊论文
DIVERSITY AND DISTRIBUTIONS, 2019, 卷号: 25, 期号: 9, 页码: 1416-1428
作者:
Yang, Yuzhan
;
Gao, Yangchun
;
Chen, Yiyong
;
Li, Shiguo
;
Zhan, Aibin
收藏
  |  
浏览/下载:11/0
  |  
提交时间:2020/10/23
biodiversity
conservation
interactome
plankton communities
water pollution
wetland
Genome-wide target interactome profiling reveals a novel EEF1A1 epigenetic pathway for oncogenic lncRNA MALAT1 in breast cancer
期刊论文
AMERICAN JOURNAL OF CANCER RESEARCH, 2019, 卷号: 9, 期号: 4
作者:
Wang, Cong
;
Li, Wei
;
Hu, Ji-Fan
;
Cui, Jiuwei
;
Hoffman, Andrew R.
收藏
  |  
浏览/下载:27/0
  |  
提交时间:2019/12/05
LncRNA
interactome
MALAT1
epigenetics
histone methylation
breast cancer
EEF1A1
Statistical analysis and heuristic identification of unexpected interactions from the neurokinase-inhibitor interactome in trigeminal neuralgia pharmacological intervention
期刊论文
JOURNAL OF CHEMOMETRICS, 2019, 卷号: 33, 期号: 6
作者:
Liu, Lei
;
Chen, Xiaobing
;
Liu, Weiju
;
Yu, Hui
;
Liu, Fangming
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2019/12/11
heuristic clustering
kinase-inhibitor interactome
molecular docking
neurokinase
statistical analysis
trigeminal neuralgia
The nuclear DEK interactome supports multi-functionality
期刊论文
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2018, 卷号: 86, 页码: 88-97
作者:
Smith, Eric A.
;
Krumpelbeck, Eric F.
;
Jegga, Anil G.
;
Prell, Malte
;
Matrka, Marie M.
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/11/26
DDX21
ribosome
interactome
IMPDH2
RPA
DEK
mass spectrometry
Synthetic Oligosaccharide Libraries and Microarray Technology: A Powerful Combination for the Success of Current Glycosaminoglycan Interactomics
期刊论文
CHEMMEDCHEM, 2018, 卷号: Vol.13 No.7, 页码: 648-661
作者:
Vitor H. Pomin
;
Xu Wang
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/12/26
de
novo
synthesis
enzymatic
synthesis
glycosaminoglycans
interactome
microarrays
oligosaccharides
Novel interacting proteins identified by tandem affinity purification coupled to nano LC-MS/MS interact with ribosomal S6 protein kinase 4 (RSK4) and its variant protein (RSK4m)
期刊论文
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2017, 卷号: 96
作者:
Liu, Riqiang
;
Liu, Tianhua
;
Wei, Wei
;
Guo, Kun
;
Yang, Ning
收藏
  |  
浏览/下载:11/0
  |  
提交时间:2019/12/05
Breast cancer
RSK4
Interactome
Variant
Tandem affinity purification
Dynamic chromatin accessibility modeled by Markov process of randomly-moving molecules in the 3D genome
其他
2017-01-01
Wang, Yinan
;
Fan, Caoqi
;
Zheng, Yuxuan
;
Li, Cheng
收藏
  |  
浏览/下载:10/0
  |  
提交时间:2017/12/03
HI-C DATA
GENE-EXPRESSION
CELL-DIFFERENTIATION
IMAGING REVEALS
ORGANIZATION
ARCHITECTURE
PRINCIPLES
REORGANIZATION
INTERACTOME
ELEMENTS
Interactome Analysis Reveals a Novel Role for RAD6 in the Regulation of Proteasome Activity and Localization in Response to DNA Damage
期刊论文
MOLECULAR AND CELLULAR BIOLOGY, 2017, 卷号: 37
作者:
An, Hongli
;
Yang, Lu
;
Wang, Chen
;
Gan, Zhixue
;
Gu, Haihui
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/11/26
DNA damage
LBR
proteasome
PSMF1
PSMD3
RAD6
interactome analysis
Investigating the regulatory roles of the microRNAs and the Argonaute 1-enriched small RNAs in plant metabolism
期刊论文
Gene, 2017, 卷号: 628, 页码: 180-189
作者:
Qin, Jingping
;
Tang, Zhonghai*
;
Ma, Xiaoxia
;
Meng, Yijun*
收藏
  |  
浏览/下载:6/0
  |  
提交时间:2019/12/23
AGO1
Argonaute 1
miRNA
microRNA
sRNA
small RNA
siRNA
small interfering RNA
PMN
Plant Metabolic Network
GO
Gene Ontology
KEGG
Kyoto Encyclopedia of Genes and Genomes
SPL
Squamosa promoter binding Protein-Like
HTS
high-throughput sequencing
RPM
reads per million
PAIR
Predicted Arabidopsis Interactome Resource
DIPOS
Database of Interacting Proteins in Oryza sativa
TAIR
The Arabidopsis Information Resource
MSU
Michigan State University
CSD
Copper/zinc Superoxide Dismutase
SSL
Strictosidine Synthase-Like
GEO
Gene Expression Omnibus
SEA
Singular Enrichment Analysis
RAP
Rice Annotation Project
Argonaute 1 (AGO1)
Degradome
microRNA (miRNA)
Network
Metabolism
Protein-protein interaction
Small RNA (sRNA)
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