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期刊论文 [14]
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Accurate and efficient protein sequence design through learning concise local environment of residues
期刊论文
BIOINFORMATICS, 2023, 卷号: 39, 期号: 3, 页码: btad122
作者:
Huang, Bin
;
Fan, Tingwen
;
Wang, Kaiyue
;
Zhang, Haicang
;
Yu, Chungong
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  |  
浏览/下载:0/0
  |  
提交时间:2023/12/07
COMPUTATIONAL DESIGN
PROLINE
FALCON2: a web server for high-quality prediction of protein tertiary structures
期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 14
作者:
Kong, Lupeng
;
Ju, Fusong
;
Zhang, Haicang
;
Sun, Shiwei
;
Bu, Dongbo
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  |  
浏览/下载:38/0
  |  
提交时间:2021/12/01
Protein structure prediction
Template-based modeling
Ab initio prediction
Protein structure prediction web service
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning (vol 20, 537, 2019)
期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 5
作者:
Zhang, Haicang
;
Zhang, Qi
;
Ju, Fusong
;
Zhu, Jianwei
;
Gao, Yujuan
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  |  
浏览/下载:49/0
  |  
提交时间:2020/12/10
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning
期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 11
作者:
Zhang, Haicang
;
Zhang, Qi
;
Ju, Fusong
;
Zhu, Jianwei
;
Gao, Yujuan
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  |  
浏览/下载:50/0
  |  
提交时间:2020/12/10
Residue-residue contacts prediction
Deep learning
Markov random fields
Composite likelihood maximization
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling
期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 10
作者:
Zhang, Haicang
;
Wang, Chao
;
Bu, Dongbo
;
Zheng, Wei-Mou
;
Sun, Shiwei
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  |  
浏览/下载:82/0
  |  
提交时间:2019/08/16
Protein structure prediction
Energy function
Attraction-basin
Reverse Monte Carlo sampling
Monte Carlo search
Linear program
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling
期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 135
作者:
Wang, Chao
;
Wei, Yi
;
Zhang, Haicang
;
Kong, Lupeng
;
Sun, Shiwei
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  |  
浏览/下载:3/0
  |  
提交时间:2020/11/26
TERTIARY STRUCTURES
FRAGMENTS
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning
期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 537
作者:
Zhang, Haicang
;
Zhang, Qi
;
Ju, Fusong
;
Zhu, Jianwei
;
Gao, Yujuan
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  |  
浏览/下载:4/0
  |  
提交时间:2020/06/16
COUPLING ANALYSIS
SEQUENCE
EVOLUTIONARY
INFORMATION
NETWORKS
RANK
Correction to: Predicting protein inter-residue contacts using composite likelihood maximization and deep learning (vol 20, 537, 2019)
期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 616
作者:
Zhang, Haicang
;
Zhang, Qi
;
Ju, Fusong
;
Zhu, Jianwei
;
Gao, Yujuan
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  |  
浏览/下载:3/0
  |  
提交时间:2020/06/16
Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts
期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 23, 页码: 3749-3757
作者:
Zhu, Jianwei
;
Zhang, Haicang
;
Li, Shuai Cheng
;
Wang, Chao
;
Kong, Lupeng
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  |  
浏览/下载:25/0
  |  
提交时间:2019/12/10
Improving prediction of burial state of residues by exploiting correlation among residues
期刊论文
BMC BIOINFORMATICS, 2017, 卷号: 18, 页码: 11
作者:
Gong, Hai'e
;
Zhang, Haicang
;
Zhu, Jianwei
;
Wang, Chao
;
Sun, Shiwei
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  |  
浏览/下载:16/0
  |  
提交时间:2019/12/12
Protein structure
Burial states of residue
Conditional random field
Residue correlation
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