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Prediction and analysis of multiple protein lysine modified sites based on conditional wasserstein generative adversarial networks
期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 17
作者:
Yang, Yingxi
;
Wang, Hui
;
Li, Wen
;
Wang, Xiaobo
;
Wei, Shizhao
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浏览/下载:17/0
  |  
提交时间:2021/12/01
Post-translational modification
Deep learning
Generative adversarial networks
Random forest
Deep Learning in Proteomics
期刊论文
PROTEOMICS, 2020, 页码: 21
作者:
Wen, Bo
;
Zeng, Wen-Feng
;
Liao, Yuxing
;
Shi, Zhiao
;
Savage, Sara R.
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  |  
浏览/下载:23/0
  |  
提交时间:2021/12/01
bioinformatics
deep learning
proteomics
MSpectraAI: a powerful platform for deciphering proteome profiling of multi-tumor mass spectrometry data by using deep neural networks
期刊论文
BMC BIOINFORMATICS, 2020, 卷号: 21, 期号: 1, 页码: 15
作者:
Wang, Shisheng
;
Zhu, Hongwen
;
Zhou, Hu
;
Cheng, Jingqiu
;
Yang, Hao
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  |  
浏览/下载:54/0
  |  
提交时间:2020/12/24
Raw mass spectrometry data
Proteome profiling
Feature swath extraction
Deep neural networks
Multi-tumor types
Leave-one-out cross prediction strategy
A survey of current trends in computational predictions of protein-protein interactions
期刊论文
FRONTIERS OF COMPUTER SCIENCE, 2020, 卷号: 14, 期号: 4, 页码: 1-9
作者:
Wang, YB (Wang, Yanbin)[ 1,2 ]
;
You, ZH (You, Zhuhong)[ 1 ]
;
Li, LP (Li, Liping)[ 1 ]
;
Chen, ZH (Chen, Zhanheng)[ 1,2 ]
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浏览/下载:25/0
  |  
提交时间:2020/04/23
proteomics
protein-protein interactions
protein feature extraction
computational proteomics
DeepCPI: A Deep Learning-based Framework for Large-scale in silico Drug Screening
期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2019, 卷号: 17, 期号: 5, 页码: 478-495
作者:
Wan, Fangping
;
Zhu, Yue
;
Hu, Hailin
;
Dai, Antao
;
Cai, Xiaoqing
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  |  
浏览/下载:27/0
  |  
提交时间:2020/07/01
Deep learning
Machine learning
Drug discovery
In silico drug screening
Compound-protein interaction prediction
pNovo 3: precise de novo peptide sequencing using a learning-to-rank framework
期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 14, 页码: I183-I190
作者:
Yang, Hao
;
Chi, Hao
;
Zeng, Wen-Feng
;
Zhou, Wen-Jing
;
He, Si-Min
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  |  
浏览/下载:54/0
  |  
提交时间:2019/12/10
Sequence-based Prediction of Protein-Protein Interactions Using Gray Wolf Optimizer-Based Relevance Vector Machine
期刊论文
EVOLUTIONARY BIOINFORMATICS, 2019, 卷号: 15, 期号: 5, 页码: 1-10
作者:
An, JY (An, Ji-Yong)[ 1,2 ]
;
You, ZH (You, Zhu-Hong)[ 3 ]
;
Zhou, Y (Zhou, Yong)[ 1,2 ]
;
Wang, DF (Wang, Da-Fu)[ 1,2 ]
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浏览/下载:46/0
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提交时间:2019/06/28
RVM
gray wolf optimizer
BIG
PSSM
Deeper investigation into the utility of functional class scoring in missing protein prediction from proteomics data.
期刊论文
Journal of bioinformatics and computational biology, 2019, 卷号: Vol.17 No.2, 页码: 1950013
作者:
Zhao, Y.a
;
Sue, A.C.-H.a
;
Goh, W.W.B.b
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  |  
浏览/下载:11/0
  |  
提交时间:2019/11/21
Proteomics
confounders
functional class scoring
missing protein problem
statistics
Quality control of single amino acid variations detected by tandem mass spectrometry
期刊论文
JOURNAL OF PROTEOMICS, 2018, 卷号: 187, 页码: 144-151
作者:
Yi, Xinpei
;
Wang, Bo
;
An, Zhiwu
;
Gong, Fuzhou
;
Li, Jing
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  |  
浏览/下载:36/0
  |  
提交时间:2018/11/16
Single amino acid variations
Mass spectrometry
Peptide identification
False discovery rate
Unrestrictive mass shift relocalization
PCLPred: A Bioinformatics Method for Predicting Protein-Protein Interactions by Combining Relevance Vector Machine Model with Low-Rank Matrix Approximation
期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2018, 卷号: 19, 期号: 4, 页码: 1-13
作者:
Li, LP (Li, Li-Ping)[ 1 ]
;
Wang, YB (Wang, Yan-Bin)[ 2 ]
;
You, ZH (You, Zhu-Hong)[ 1 ]
;
Li, Y (Li, Yang)[ 1 ]
;
An, JY (An, Ji-Yong)[ 3 ]
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  |  
浏览/下载:18/0
  |  
提交时间:2018/10/30
Protein-protein Interactions (Ppi)
Low Rank
Protein Sequence
Relevance Vector Machine (Rvm)
Evolutionary Information
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