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科研机构
北京大学 [9]
西安交通大学 [5]
理论物理研究所 [5]
上海大学 [4]
上海应用物理研究所 [3]
兰州大学 [2]
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期刊论文 [37]
会议论文 [3]
发表日期
2016 [40]
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Chemistry [3]
Physics [2]
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Molecular mechanism of R-bicalutamide switching from androgen receptor antagonist to agonist induced by amino acid mutations using molecular dynamics simulations and free energy calculation
期刊论文
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2016, 卷号: 30, 期号: 1-12, 页码: 1189-1200
作者:
Liu, HL
;
Han, R
;
Li, JZ
;
Liu, HX
;
Zheng, LF
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2017/05/09
R-bicalutamide
Androgen receptor antagonist
Molecular dynamics simulations
MM-GBSA
Drug-resistant mechanism
Liquid-Crystalline Ionic Liquids as Ordered Reaction Media for the Diels-Alder Reaction
期刊论文
CHEMISTRY-A EUROPEAN JOURNAL, 2016, 卷号: 22, 期号: 45, 页码: 16113-16123
作者:
Gao, Yanan
;
Slattery, John M.
;
Shimizu, Karina
;
Bruce, Duncan W.
;
Canongia Lopes, Jose Nuno
收藏
  |  
浏览/下载:180/0
  |  
提交时间:2019/06/20
Diels-alder Reaction
Ionic Liquids
Liquid Crystals
Molecular Dynamics Simulations
Ordered Solvents
Thermal wave propagation in graphene studied by molecular dynamics simulations
期刊论文
2016, 2016
Wen-Jun Yao
;
Bing-Yang Cao
;
Wen-Jun Yao
;
Bing-Yang Cao
收藏
  |  
浏览/下载:5/0
Jarzynski matrix equality: Calculating the free-energy difference by nonequilibrium simulations with an arbitrary initial distribution
期刊论文
PHYSICAL REVIEW E, 2016, 卷号: 93, 期号: 4, 页码: 43312
作者:
Wan, B
;
Yang, C
;
Wang, YT
;
Zhou, X
收藏
  |  
浏览/下载:11/0
  |  
提交时间:2019/04/08
MOLECULAR-DYNAMICS SIMULATIONS
EQUILIBRIUM
ERROR
CRYSTALLIZATION
LIQUIDS
SYSTEMS
DRIVEN
FORCE
RATES
Role of the Electrostatic Interactions in the Stabilization of Ionic Liquid Crystals: Insights from Coarse-Grained MD Simulations of an Imidazolium Model
期刊论文
JOURNAL OF PHYSICAL CHEMISTRY B, 2016, 卷号: 120, 期号: 34, 页码: 9152-9160
作者:
Saielli, G
;
Wang, YT
收藏
  |  
浏览/下载:19/0
  |  
提交时间:2019/04/08
MOLECULAR-DYNAMICS SIMULATIONS
FORCE-FIELD
SPATIAL HETEROGENEITY
ATOMISTIC SIMULATIONS
DICYANAMIDE ANIONS
TAIL AGGREGATION
SOLAR-CELLS
PHASE
MESOMORPHISM
TRANSITION
Different nanostructures caused by competition of intra- and inter-beta-sheet interactions in hierarchical self-assembly of short peptides
期刊论文
JOURNAL OF COLLOID AND INTERFACE SCIENCE, 2016, 卷号: 464, 页码: 219-228
作者:
Zhou, P
;
Deng, L
;
Wang, YT
;
Lu, JR
;
Xu, H
收藏
  |  
浏览/下载:9/0
  |  
提交时间:2019/04/08
Short peptides
AMINO-ACID-SEQUENCE
Self-assembly
MOLECULAR-DYNAMICS
Nanostructures
SIMULATIONS
Intermolecular interactions
AMPHIPHILES
Molecular packing modes
PROTEINS
Molecular dynamics
FIBRILS
SYSTEMS
BIOMATERIALS
STABILITY
INSIGHTS
Free Energy Calculation for Base Pair Dissociation in a DNA Duplex
期刊论文
ACTA PHYSICO-CHIMICA SINICA, 2016, 卷号: 32, 期号: 5, 页码: 1282-1288
作者:
Wu, SG
;
Feng, D
收藏
  |  
浏览/下载:13/0
  |  
提交时间:2019/04/08
Potential of mean force
MOLECULAR-DYNAMICS SIMULATIONS
Hydrogen bond
PARTICLE MESH EWALD
Molecular dynamics simulation
NUCLEIC-ACIDS
Umbrella sampling
FORCE-FIELD
RNA
TRIPHOSPHATE
MECHANICS
GROMACS
Equilibrium sampling by reweighting nonequilibrium simulation trajectories
期刊论文
PHYSICAL REVIEW E, 2016, 卷号: 93, 期号: 3, 页码: 33309
作者:
Yang, C
;
Wan, B
;
Xu, S
;
Wang, YT
;
Zhou, X
收藏
  |  
浏览/下载:11/0
  |  
提交时间:2019/04/08
MOLECULAR-DYNAMICS SIMULATIONS
FREE-ENERGY DIFFERENCES
MONTE-CARLO
JARZYNSKIS EQUALITY
TRANSITIONS
GLASSES
LIQUIDS
ERROR
FORCE
Study on the differences of Na- and Ca-montmorillonites in crystalline swelling regime through molecular dynamics simulation
期刊论文
Advanced Powder Technology, 2016, 卷号: 27, 期号: 2, 页码: 779-785
作者:
Zhang, Xian
;
Yi, Hao
;
Zhao, Yunliang
;
Min, Fanfei
;
Song, Shaoxian*
收藏
  |  
浏览/下载:35/0
  |  
提交时间:2019/12/04
Montmorillonite
Crystalline swelling
Molecular dynamics simulations
Self-diffusion coefficient
Molecular Dynamics Simulations of the Orientation Effect on the Initial Plastic Deformation of Magnesium Single Crystals
期刊论文
Acta Metallurgica Sinica (English Letters), 2016, 卷号: 29, 期号: 3, 页码: 301-312
作者:
Zu, Qun
;
Guo, Ya-Fang*
;
Xu, Shuang
;
Tang, Xiao-Zhi
;
Wang, Yue-Sheng
收藏
  |  
浏览/下载:6/0
  |  
提交时间:2019/12/04
Molecular dynamics simulations
Magnesium
Plastic deformation
Orientation
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