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科研机构
湖南农业大学 [6]
内容类型
期刊论文 [6]
发表日期
2018 [1]
2017 [1]
2016 [1]
2015 [2]
2012 [1]
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专题:湖南农业大学
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Investigating microRNA-mediated regulation of the nascent nuclear transcripts in plants: a bioinformatics workflow
期刊论文
Briefings in Bioinformatics, 2018, 卷号: 19, 期号: 6, 页码: 1317-1324
作者:
Yu, Dongliang
;
Tang, Zhonghai
;
Shao, Chaogang
;
Ma, Xiaoxia
;
Xiang, Taihe
收藏
  |  
浏览/下载:10/0
  |  
提交时间:2019/12/23
plant microRNA
nascent nuclear transcript
slicing site
intron
exon-intron/intron-exon junction
degradome sequencing (degradome-seq)
Investigating the regulatory roles of the microRNAs and the Argonaute 1-enriched small RNAs in plant metabolism
期刊论文
Gene, 2017, 卷号: 628, 页码: 180-189
作者:
Qin, Jingping
;
Tang, Zhonghai*
;
Ma, Xiaoxia
;
Meng, Yijun*
收藏
  |  
浏览/下载:6/0
  |  
提交时间:2019/12/23
AGO1
Argonaute 1
miRNA
microRNA
sRNA
small RNA
siRNA
small interfering RNA
PMN
Plant Metabolic Network
GO
Gene Ontology
KEGG
Kyoto Encyclopedia of Genes and Genomes
SPL
Squamosa promoter binding Protein-Like
HTS
high-throughput sequencing
RPM
reads per million
PAIR
Predicted Arabidopsis Interactome Resource
DIPOS
Database of Interacting Proteins in Oryza sativa
TAIR
The Arabidopsis Information Resource
MSU
Michigan State University
CSD
Copper/zinc Superoxide Dismutase
SSL
Strictosidine Synthase-Like
GEO
Gene Expression Omnibus
SEA
Singular Enrichment Analysis
RAP
Rice Annotation Project
Argonaute 1 (AGO1)
Degradome
microRNA (miRNA)
Network
Metabolism
Protein-protein interaction
Small RNA (sRNA)
Characterization and function of Tomato yellow leaf curl virus-derived small RNAs generated in tolerant and susceptible tomato varieties
期刊论文
Journal of Integrative Agriculture, 2016, 卷号: 15, 期号: 8, 页码: 1785-1797
作者:
Bai Miao
;
Yang Guo-shun
;
Chen Wen-ting
;
Lin Run-mao
;
Ling Jiang
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/23
Tomato yellow leaf curl virus
virus-induced RNA silencing
virus-derived small RNA
degradome
The use of high-throughput sequencing methods for plant microRNA research
期刊论文
RNA BIOLOGY, 2015, 卷号: 12, 期号: 7, 页码: 709-719
作者:
Ma, Xiaoxia
;
Tang, Zhonghai*
;
Qin, Jingping
;
Meng, Yijun
收藏
  |  
浏览/下载:8/0
  |  
提交时间:2019/12/23
Degradome-seq
DsRNA-seq
Plant microRNA
RNA-PET-seq
SRNA-seq
SsRNA-seq
Construction of regulatory networks mediated by small RNAs responsive to abiotic stresses in rice (Oryza sativa)
期刊论文
Computational Biology and Chemistry, 2015, 卷号: 58, 页码: 69-80
作者:
Qin, Jingping
;
Ma, Xiaoxia
;
Tang, Zhonghai
;
Meng, Yijun*
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/23
Abiotic stress
Argonaute 1 (AGO1)
Degradome
High-throughput sequencing (HTS)
Network
Rice small RNA (sRNA)
Signal interaction
A Combined Approach of High-Throughput Sequencing and Degradome Analysis Reveals Tissue Specific Expression of MicroRNAs and Their Targets in Cucumber
期刊论文
PLOS ONE, 2012, 卷号: 7, 期号: 3, 页码: e33040
作者:
Mao, Weihua*
;
Li, Zeyun
;
Xia, Xiaojian
;
Li, Yadan
;
Yu, Jingquan
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/23
MicroRNAs,Cucumber,Transcription factors,Leaves,RNA sequence analysis,RNA sequencing,Cellular stress responses,Transcriptional control
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