Potential allopolyploid origin of Ericales revealed with gene-tree reconciliation

doi:10.3389/fpls.2022.1006904

CORC > 植物研究所 > 中国科学院植物研究所 > 系统与进化植物学国家重点实验室

	Potential allopolyploid origin of Ericales revealed with gene-tree reconciliation
	Nie, Shuai ; Tian, Xue-Chan ; Kong, Lei ; Zhao, Shi-Wei ; Chen, Zhao-Yang ; Jiao, Si-Qian ; El-Kassaby, Yousry A.; Porth, Ilga 6; Yang, Fu-Sheng ; Zhao, Wei 2
刊名	FRONTIERS IN PLANT SCIENCE
	2022
卷号	13
关键词	Ericales allopolyploidization whole genome duplication gene loss hybridization
ISSN号	1664-462X
DOI	10.3389/fpls.2022.1006904
文献子类	Article
英文摘要	Few incidents of ancient allopolyploidization (polyploidization by hybridization or merging diverged genomes) were previously revealed, although there is significant evidence for the accumulation of whole genome duplications (WGD) in plants. Here, we focused on Ericales, one of the largest and most diverse angiosperm orders with significant ornamental and economic value. Through integrating 24 high-quality whole genome data selected from similar to 200 Superasterids genomes/species and an algorithm of topology-based genetree reconciliation, we explored the evolutionary history of in Ericales with ancient complex. We unraveled the allopolyploid origin of Ericales and detected extensive lineage-specific gene loss following the polyploidization. Our study provided a new hypothesis regarding the origin of Ericales and revealed an instructive perspective of gene loss as a pervasive source of genetic variation and adaptive phenotypic diversity in Ericales.
学科主题	Plant Sciences
出版地	LAUSANNE
WOS关键词	MOLECULAR PHYLOGENETICS ; GENOME DUPLICATIONS ; EVOLUTION ; DIVERSIFICATION ; POLYPLOIDY ; ANGIOSPERMS ; PATTERNS ; PLANTS
WOS研究方向	Science Citation Index Expanded (SCI-EXPANDED)
语种	英语
出版者	FRONTIERS MEDIA SA
WOS记录号	WOS:000979652800001
资助机构	National Natural Science Foundation of China [32171816] ; China Scholarship Council
内容类型	期刊论文
源URL	[http://ir.ibcas.ac.cn/handle/2S10CLM1/29044]
专题	系统与进化植物学国家重点实验室
作者单位	1.Beijing Forestry Univ, Coll Biol Sci & Technol,Minist Educ, Beijing Adv Innovat Ctr Tree Breeding Mol Design, Natl Engn Lab Tree Breeding,Key Lab Genet & Breed, Beijing, Peoples R China 2.Univ Chinese Acad Sci, Beijing, Peoples R China 3.China Natl Bot Garden, Beijing, Peoples R China 4.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China 5.Univ Laval, Fac Foresterie, Dept Sci Bois & Foret Geog & Geomat, Quebec City, PQ, Canada 6.El-Kassaby, Yousry A.] Univ British Columbia, Dept Forest & Conservat Sci, Fac Forestry, Vancouver, BC, Canada 7.Pingdingshan Univ, Henan Key Lab Germplasm Innovat & Utilizat Eco Ec, Pingdingshan, Peoples R China 8.Umea Univ, Dept Ecol & Environm Sci, Umea Plant Sci Ctr, Umea, Sweden
推荐引用方式 GB/T 7714	Nie, Shuai,Tian, Xue-Chan,Kong, Lei,et al. Potential allopolyploid origin of Ericales revealed with gene-tree reconciliation[J]. FRONTIERS IN PLANT SCIENCE,2022,13.
APA	Nie, Shuai.,Tian, Xue-Chan.,Kong, Lei.,Zhao, Shi-Wei.,Chen, Zhao-Yang.,...&Mao, Jian-Feng.(2022).Potential allopolyploid origin of Ericales revealed with gene-tree reconciliation.FRONTIERS IN PLANT SCIENCE,13.
MLA	Nie, Shuai,et al."Potential allopolyploid origin of Ericales revealed with gene-tree reconciliation".FRONTIERS IN PLANT SCIENCE 13(2022).