Diversity, phylogeny, and adaptation of bryophytes: insights from genomic and transcriptomic data

doi:10.1093/jxb/erac127

CORC > 植物研究所 > 中国科学院植物研究所 > 系统与进化植物学国家重点实验室

	Diversity, phylogeny, and adaptation of bryophytes: insights from genomic and transcriptomic data
	Wang, Qing-Hua ; Zhang, Jian ; Liu, Yang 1,2; Jia, Yu ; Jiao, Yuan-Nian ; Xu, Bo ; Chen, Zhi-Duan
刊名	JOURNAL OF EXPERIMENTAL BOTANY
	2022
卷号	73 期号:13 页码:4306-4322
关键词	Adaptation genome hornworts liverworts mosses plant terrestrialization transcriptome
ISSN号	0022-0957
DOI	10.1093/jxb/erac127
文献子类	Review
英文摘要	We review recent advances in the knowledge of bryophyte diversity, phylogeny, and adaptation made using genomic and transcriptomic data, and particularly emphasize their adaptation to early land environments and modern ecosystems. Bryophytes including mosses, liverworts, and hornworts are among the earliest land plants, and occupy a crucial phylogenetic position to aid in the understanding of plant terrestrialization. Despite their small size and simple structure, bryophytes are the second largest group of extant land plants. They live ubiquitously in various habitats and are highly diversified, with adaptive strategies to modern ecosystems on Earth. More and more genomes and transcriptomes have been assembled to address fundamental questions in plant biology. Here, we review recent advances in bryophytes associated with diversity, phylogeny, and ecological adaptation. Phylogenomic studies have provided increasing supports for the monophyly of bryophytes, with hornworts sister to the Setaphyta clade including liverworts and mosses. Further comparative genomic analyses revealed that multiple whole-genome duplications might have contributed to the species richness and morphological diversity in mosses. We highlight that the biological changes through gene gain or neofunctionalization that primarily evolved in bryophytes have facilitated the adaptation to early land environments; among the strategies to adapt to modern ecosystems in bryophytes, desiccation tolerance is the most remarkable. More genomic information for bryophytes would shed light on key mechanisms for the ecological success of these 'dwarfs' in the plant kingdom.
学科主题	Plant Sciences
电子版国际标准刊号	1460-2431
出版地	OXFORD
WOS关键词	EARLY LAND PLANTS ; PHYSCOMITRELLA-PATENS ; ANTARCTIC MOSS ; EVOLUTIONARY INSIGHTS ; MARCHANTIA-POLYMORPHA ; POHLIA-NUTANS ; B RADIATION ; KNOX GENES ; DIVERSIFICATION ; REVEALS
WOS研究方向	Science Citation Index Expanded (SCI-EXPANDED)
语种	英语
出版者	OXFORD UNIV PRESS
WOS记录号	WOS:000811211600001
资助机构	National Natural Science Foundation of China [NNSF 32070233, 31970214] ; Open Research Foundation of State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences [LSEB2021-2]
内容类型	期刊论文
源URL	[http://ir.ibcas.ac.cn/handle/2S10CLM1/28616]
专题	系统与进化植物学国家重点实验室
作者单位	1.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing 100093, Peoples R China 2.Fairy Lake Bot Garden, Lab Southern Subtrop Plant Divers, Shenzhen 518004, Peoples R China 3.Chinese Acad Sci, Shenzhen 518004, Peoples R China
推荐引用方式 GB/T 7714	Wang, Qing-Hua,Zhang, Jian,Liu, Yang,et al. Diversity, phylogeny, and adaptation of bryophytes: insights from genomic and transcriptomic data[J]. JOURNAL OF EXPERIMENTAL BOTANY,2022,73(13):4306-4322.
APA	Wang, Qing-Hua.,Zhang, Jian.,Liu, Yang.,Jia, Yu.,Jiao, Yuan-Nian.,...&Chen, Zhi-Duan.(2022).Diversity, phylogeny, and adaptation of bryophytes: insights from genomic and transcriptomic data.JOURNAL OF EXPERIMENTAL BOTANY,73(13),4306-4322.
MLA	Wang, Qing-Hua,et al."Diversity, phylogeny, and adaptation of bryophytes: insights from genomic and transcriptomic data".JOURNAL OF EXPERIMENTAL BOTANY 73.13(2022):4306-4322.