Comparative Mitogenomic Analyses and New Insights into the Phylogeny of Thamnocephalidae (Branchiopoda: Anostraca) | |
Sun, Xiaoyan(孙晓燕); Cheng, Jinhui(陈金辉)2 | |
刊名 | GENES |
2022-10-01 | |
卷号 | 13期号:10页码:12 |
关键词 | Thamnocephalidae mitochondrial genome phylogeny non-monophyly of Branchinella |
DOI | 10.3390/genes13101765 |
英文摘要 | Thamnocephalidae, a family of Anostraca which is widely distributed on all continents of the world except Antarctica, currently consists of six genera and approximately 63 recognized species. The relationships among genera in Thamnocephalidae and the monophyly of Thamnocephalidae, determined using morphological characteristics or gene markers, remain controversial. In order to address the relationships within Thamnocephalidae, we sequenced Branchinella kugenumaensis mitogenomes and conducted a comparative analysis to reveal the divergence across mitogenomes of B. kugenumaensis. Using newly obtained mitogenomes together with available Anostracan genomic sequences, we present the most complete phylogenomic understanding of Anostraca to date. We observed high divergence across mitogenomes of B. kugenumaensis. Meanwhile, phylogenetic analyses based on both amino acids and nucleotides of the protein-coding genes (PCG) provide significant support for a non-monophyletic Thamnocephalidae within Anostraca, with Asian Branchinella more closely related to Streptocephalidae than Australian Branchinella. The phylogenetic relationships within Anostraca were recovered as follows: Branchinectidae + Chirocephalidae as the basal group of Anostraca and halophilic Artemiidae as a sister to the clade Thamnocephalidae + Streptocephalidae. Both Bayesian inference (BI)- and maximum likelihood (ML)-based analyses produced identical topologies. |
资助项目 | National Natural Science Foundation of China[42072022] ; National Natural Science Foundation of China[41730317] ; Chinese Academy of Geological Sciences[DD20221829] ; State Key Laboratory of Palaeobiology and Stratigraphy at Nanjing Institute of Geology and Plaeontology, Chinese Academy of Sciences |
WOS关键词 | COMPLETE MITOCHONDRIAL GENOME ; CENTRAL DISTRICT ; CLAM SHRIMP ; CRUSTACEA ; GENUS ; SPINICAUDATA ; FAMILIES ; PHYLOGEOGRAPHY ; MORPHOLOGY ; CHECKLIST |
WOS研究方向 | Genetics & Heredity |
语种 | 英语 |
出版者 | MDPI |
WOS记录号 | WOS:000872866500001 |
资助机构 | National Natural Science Foundation of China ; Chinese Academy of Geological Sciences ; State Key Laboratory of Palaeobiology and Stratigraphy at Nanjing Institute of Geology and Plaeontology, Chinese Academy of Sciences |
内容类型 | 期刊论文 |
源URL | [http://ir.nigpas.ac.cn/handle/332004/41377] |
专题 | 中国科学院南京地质古生物研究所 |
通讯作者 | Cheng, Jinhui(陈金辉) |
作者单位 | 1.Chinese Acad Sci, Ctr Excellence Life & Palaeoenvironm, 39 Beijing Eastrd, Nanjing 210008, Peoples R China 2.Chinese Acad Sci, State Key Lab Palaeobiol & Stratig, Nanjing Inst Geol & Palaeontol, 39 Beijing Eastrd, Nanjing 210008, Peoples R China |
推荐引用方式 GB/T 7714 | Sun, Xiaoyan,Cheng, Jinhui. Comparative Mitogenomic Analyses and New Insights into the Phylogeny of Thamnocephalidae (Branchiopoda: Anostraca)[J]. GENES,2022,13(10):12. |
APA | Sun, Xiaoyan,&Cheng, Jinhui.(2022).Comparative Mitogenomic Analyses and New Insights into the Phylogeny of Thamnocephalidae (Branchiopoda: Anostraca).GENES,13(10),12. |
MLA | Sun, Xiaoyan,et al."Comparative Mitogenomic Analyses and New Insights into the Phylogeny of Thamnocephalidae (Branchiopoda: Anostraca)".GENES 13.10(2022):12. |
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