Genome of the estuarine oyster provides insights into climate impact and adaptive plasticity

doi:10.1038/s42003-021-02823-6

CORC > 海洋研究所 > 中国科学院海洋研究所 > 实验海洋生物学重点实验室

	Genome of the estuarine oyster provides insights into climate impact and adaptive plasticity
	Li, Ao 4,5,6; Dai, He 3; Guo, Ximing 2; Zhang, Ziyan 1,5,6,8; Zhang, Kexin 1,5,6,8; Wang, Chaogang 1,5,6,8; Wang, Xinxing 1,5,6,8; Wang, Wei 1,5,6,7; Chen, Hongju 3; Li, Xumin 3
刊名	COMMUNICATIONS BIOLOGY
	2021-11-12
卷号	4 期号:1 页码:12
DOI	10.1038/s42003-021-02823-6
通讯作者	Li, Li(lili@qdio.ac.cn) ; Zhang, Guofan(gzhang@qdio.ac.cn)
英文摘要	Understanding the roles of genetic divergence and phenotypic plasticity in adaptation is central to evolutionary biology and important for assessing adaptive potential of species under climate change. Analysis of a chromosome-level assembly and resequencing of individuals across wide latitude distribution in the estuarine oyster (Crassostrea ariakensis) revealed unexpectedly low genomic diversity and population structures shaped by historical glaciation, geological events and oceanographic forces. Strong selection signals were detected in genes responding to temperature and salinity stress, especially of the expanded solute carrier families, highlighting the importance of gene expansion in environmental adaptation. Genes exhibiting high plasticity showed strong selection in upstream regulatory regions that modulate transcription, indicating selection favoring plasticity. Our findings suggest that genomic variation and population structure in marine bivalves are heavily influenced by climate history and physical forces, and gene expansion and selection may enhance phenotypic plasticity that is critical for the adaptation to rapidly changing environments. Ao Li, He Dai, and Ximing Guo et al. present a high-quality genome from the estuarine oyster, Crassostrea ariakensis. They highlight the climate impact on population divergence, a suite of genes likely important for adaptation to environments of different temperatures and salinities, and provide further insight into the evolution of this species.
资助项目	Strategic Priority Research Program of the Chinese Academy of Sciences[XDA23050402] ; National Key R&D Program of China[2018YFD0900304] ; National Natural Science Foundation of China[32101353] ; China Postdoctoral Science Foundation[2019TQ0324] ; Key Deployment Project of Centre for Ocean Mega-Research of Science, Chinese Academy of Sciences[COMS2019Q06] ; Distinguished Young Scientists Research Fund of Key Laboratory of Experimental Marine Biology, Chinese Academy of Sciences[KLEMBDYS04] ; Technology and the Modern Agro-industry Technology Research System[CARS-49]
WOS研究方向	Life Sciences & Biomedicine - Other Topics ; Science & Technology - Other Topics
语种	英语
出版者	NATURE PORTFOLIO
WOS记录号	WOS:000718004600009
内容类型	期刊论文
源URL	[http://ir.qdio.ac.cn/handle/337002/177221]
专题	海洋研究所_实验海洋生物学重点实验室海洋研究所_海洋生态与环境科学重点实验室
通讯作者	Li, Li; Zhang, Guofan
作者单位	1.Pilot Natl Lab Marine Sci & Technol, Lab Marine Fisheries Sci & Food Prod Proc, Qingdao, Peoples R China 2.Rutgers State Univ, Dept Marine & Coastal Sci, Haskin Shellfish Res Lab, Port Norris, NJ USA 3.Biomarker Technol Corp, Beijing, Peoples R China 4.Pilot Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao, Peoples R China 5.Chinese Acad Sci, Ctr Ocean Megasci, Inst Oceanol, Shandong Prov Key Lab Expt Marine Biol, Qingdao, Peoples R China 6.Chinese Acad Sci, Qingdao, Peoples R China 7.Chinese Acad Sci, Inst Oceanol, Natl & Local Joint Engn Key Lab Ecol Mariculture, Qingdao, Peoples R China 8.Univ Chinese Acad Sci, Beijing, Peoples R China
推荐引用方式 GB/T 7714	Li, Ao,Dai, He,Guo, Ximing,et al. Genome of the estuarine oyster provides insights into climate impact and adaptive plasticity[J]. COMMUNICATIONS BIOLOGY,2021,4(1):12.
APA	Li, Ao.,Dai, He.,Guo, Ximing.,Zhang, Ziyan.,Zhang, Kexin.,...&Zhang, Guofan.(2021).Genome of the estuarine oyster provides insights into climate impact and adaptive plasticity.COMMUNICATIONS BIOLOGY,4(1),12.
MLA	Li, Ao,et al."Genome of the estuarine oyster provides insights into climate impact and adaptive plasticity".COMMUNICATIONS BIOLOGY 4.1(2021):12.