The effect of plant compartments on the Broussonetia papyrifera-associated fungal and bacterial communities

doi:10.1007/s00253-020-10466-6

CORC > 植物研究所 > 中国科学院植物研究所 > 中科院北方资源植物重点实验室

	The effect of plant compartments on the Broussonetia papyrifera-associated fungal and bacterial communities
	Chen, Peilin 1; Zhao, Meilin 1; Tang, Feng 1; Hu, Yanmin 1; Peng, Xianjun ; Shen, Shihua
刊名	APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
	2020
卷号	104 期号:8 页码:3627-3641
关键词	B papyrifera Plant compartment Fungal community Bacterial community Predicted function
ISSN号	0175-7598
DOI	10.1007/s00253-020-10466-6
文献子类	Article
英文摘要	Plants associate with numerous microbes, but little is known about how microbiome components, especially fungi, adapt to specific plant compartments. The adaptability of microbial function to the plant compartment is also not clear especially for woody species. Here, we characterized the bacterial and fungal communities in root endosphere, stems, and rhizospheres of 33 Broussonetia papyrifera seedlings, based on amplification of 16S and ITS rRNA. Results showed that the alpha-diversity indexes of the bacterial community were significantly different in different plant compartments and they significantly increased from stem to root endosphere to the rhizosphere, whereas those of the fungal community were similar (p > 0.05). However, the result of constrained PCoA (CPCoA) and analysis of similarity (ANOSIM) showed that both bacterial and fungal compositions were significantly affected by plant compartments (p < 0.01). In detail, the operational taxonomic units (OTUs) distribution of the bacterial community was significantly different, but 249 of 252 fungal OTUs were shared in different plant compartments. Both the bacterial and fungal compositions were significantly influenced by plant compartments, based on the result on phyla, core OTUs, and indicator OTUs level. Further, 40 of 42 enriched KEGG pathways involving the bacteria also differed significantly among plant compartments (p < 0.01). This study provides an understanding of the influence of plant compartments on the microbiome and confirms that the disperse limitation of fungal OTUs across different plant compartments is smaller. This study sheds light on how the microbial community adapts to and thrives in different plant compartments.
学科主题	Biotechnology & Applied Microbiology
电子版国际标准刊号	1432-0614
出版地	NEW YORK
WOS关键词	MICROBIAL COMMUNITIES ; SIGNALING SYSTEMS ; RHIZOSPHERE ; PHYLLOSPHERE ; DIVERSITY ; COLONIZATION ; ECOLOGY ; FRIEND ; ROOTS ; SOIL
WOS研究方向	Biotechnology & Applied Microbiology
语种	英语
出版者	SPRINGER
WOS记录号	WOS:000518111700001
资助机构	National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [31770360, 31870247] ; Poverty Relief Project of the Chinese Academy of Sciences [KFJ-FP-24] ; Huimin Technology Demonstration Project of the National Modern Agricultural Science and Technology Achievements City [Z151100001015008]
内容类型	期刊论文
源URL	[http://ir.ibcas.ac.cn/handle/2S10CLM1/21883]
专题	中科院北方资源植物重点实验室
作者单位	1.Chinese Acad Sci, Inst Bot, Key Lab Plant Resources, Beijing 100093, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
推荐引用方式 GB/T 7714	Chen, Peilin,Zhao, Meilin,Tang, Feng,et al. The effect of plant compartments on the Broussonetia papyrifera-associated fungal and bacterial communities[J]. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY,2020,104(8):3627-3641.
APA	Chen, Peilin,Zhao, Meilin,Tang, Feng,Hu, Yanmin,Peng, Xianjun,&Shen, Shihua.(2020).The effect of plant compartments on the Broussonetia papyrifera-associated fungal and bacterial communities.APPLIED MICROBIOLOGY AND BIOTECHNOLOGY,104(8),3627-3641.
MLA	Chen, Peilin,et al."The effect of plant compartments on the Broussonetia papyrifera-associated fungal and bacterial communities".APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 104.8(2020):3627-3641.