Transcriptome analysis of ripe peach (Prunus persica) fruit under low-dose UVB radiation

doi:10.1016/j.scienta.2019.108757

CORC > 烟台海岸带研究所 > 中国科学院烟台海岸带研究所 > 中科院烟台海岸带研究所知识产出

	Transcriptome analysis of ripe peach (Prunus persica) fruit under low-dose UVB radiation
	Li, C ; Chen, M ; Ji, ML ; Wang, XX ; Xiao, W ; Li, L ; Gao, DS ; Chen, XD ; Li, DM
刊名	SCIENTIA HORTICULTURAE
	2020-01-03
卷号	259 页码:108757
关键词	Peach Low-dose UVB radiation RNA-seq Ethylene signaling pathway Carbohydrate metabolism
ISSN号	0304-4238
DOI	10.1016/j.scienta.2019.108757
产权排序	[Li, Chen ; Ji, Meiling ; Wang, Xuxu ; Xiao, Wei ; Li, Ling ; Gao, Dongsheng ; Chen, Xiude ; Li, Dongmei] Shandong Agr Univ, Coll Hort Sci & Engn, 61 Daizong St, Tai An 271018, Shandong, Peoples R China ; [Li, Chen ; Ji, Meiling ; Wang, Xuxu ; Xiao, Wei ; Li, Ling ; Gao, Dongsheng ; Chen, Xiude ; Li, Dongmei] Shandong Agr Univ, State Key Lab Crop Biol, 61 Daizong St, Tai An, Shandong, Peoples R China ; [Li, Chen ; Ji, Meiling ; Wang, Xuxu ; Xiao, Wei ; Li, Ling ; Gao, Dongsheng ; Chen, Xiude ; Li, Dongmei] Shandong Collaborat Innovat Ctr Fruit & Vegetable, 61 Daizong St, Tai An 271018, Shandong, Peoples R China ; [Chen, Min] Chinese Acad Sci, Yantai Inst Coastal Zone Res, Yantai 264003, Peoples R China ; [Chen, Min] Chinese Acad Sci, Ctr Ocean Mega Sci, Yantai 264003, Peoples R China
文献子类	Article
英文摘要	UVB radiation (280-320 nm) plays an important role in plant growth and development. High UVB radiation results in DNA damage, growth inhibition and cell death, but low-dose UVB radiation does not, and can affect plant metabolism. Here, we analyzed the transcriptomic changes in peach fruit subjected to low-dose UVB radiation compared with natural light conditions during the process of growth and development using RNA-seq. We identified a total of 41,145,768 and 40,163,165 clean reads from the two samples, and 1342 genes passed the Cuffdiff test and were considered differentially expressed genes (DEGs). Among the DEGs, we identified 40 genes related to ethylene signaling pathway and several genes related to carbohydrate metabolism that were responsive to low-dose UVB radiation. Quantitative real-time PCR was used to validate the expression levels of 20 of the DEGs. In conclusion, the present study identified potential genes involved in the peach fruit response to low-dose UVB radiation through a genome-wide analysis of DEGs. Further characterization of the DEGs identified in this study could advance our understanding of the mechanisms that regulate ethylene signal and carbohydrate metabolism in peach fruit under low-dose UVB radiation.
WOS关键词	ETHYLENE SIGNALING PATHWAY ; GENE-EXPRESSION ; ULTRAVIOLET-B ; BIOSYNTHESIS ; ARABIDOPSIS ; RESISTANCE ; RESPONSES ; HORMONE ; LEAVES ; BERRY
WOS研究方向	Horticulture
语种	英语
WOS记录号	WOS:000490046400035
资助机构	National Natural Science Foundation of ChinaNational Natural Science Foundation of China [31601706] ; Natural Science Foundation of Shandong ProvinceNatural Science Foundation of Shandong Province [ZR2016CM09]
内容类型	期刊论文
源URL	[http://ir.yic.ac.cn/handle/133337/24772]
专题	烟台海岸带研究所_中科院烟台海岸带研究所知识产出中国科学院烟台海岸带研究所
作者单位	1.Chinese Acad Sci, Yantai Inst Coastal Zone Res, Yantai 264003, Peoples R China; 2.Shandong Agr Univ, Coll Hort Sci & Engn, 61 Daizong St, Tai An 271018, Shandong, Peoples R China; 3.Shandong Agr Univ, State Key Lab Crop Biol, 61 Daizong St, Tai An, Shandong, Peoples R China; 4.Shandong Collaborat Innovat Ctr Fruit & Vegetable, 61 Daizong St, Tai An 271018, Shandong, Peoples R China; 5.Chinese Acad Sci, Ctr Ocean Mega Sci, Yantai 264003, Peoples R China
推荐引用方式 GB/T 7714	Li, C,Chen, M,Ji, ML,et al. Transcriptome analysis of ripe peach (Prunus persica) fruit under low-dose UVB radiation[J]. SCIENTIA HORTICULTURAE,2020,259:108757.
APA	Li, C.,Chen, M.,Ji, ML.,Wang, XX.,Xiao, W.,...&Li, DM.(2020).Transcriptome analysis of ripe peach (Prunus persica) fruit under low-dose UVB radiation.SCIENTIA HORTICULTURAE,259,108757.
MLA	Li, C,et al."Transcriptome analysis of ripe peach (Prunus persica) fruit under low-dose UVB radiation".SCIENTIA HORTICULTURAE 259(2020):108757.