Identification of SNPs with different allele frequencies in China and Japan population of Pacific abalone (Haliotis discus hannai)

doi:10.1007/s12686-015-0505-8

CORC > 自然资源部第一海洋研究所 > 自然资源部第一海洋研究所 > 业务部门 > 海洋生态研究中心

	Identification of SNPs with different allele frequencies in China and Japan population of Pacific abalone (Haliotis discus hannai)
	Yu, Qian 1; Li, Yangping 1; Xing, Qiang 1; Hao, Linhua 2; Li, Xue 1; Zhang, Meiwei 1; Wang, Yangfan 1; Hu, Xiaoli 1; Bao, Zhenmin 1
刊名	CONSERVATION GENETICS RESOURCES
	2015-12
卷号	7 期号:4 页码:837-840
关键词	Haliotis discus hannai Population informative SNP Marker development
ISSN号	1877-7252
DOI	10.1007/s12686-015-0505-8
英文摘要	Hybrids produced by crossing between China and Japan Pacific abalone populations exhibited heterosis and have been applied extensively in aquaculture production in China. Identification of population informative loci for China and Japan populations is important for the genetic resource conservation and our understanding of heterosis in Pacific abalone. With the advantage of high genomic abundance and low redundance, SNPs have gained much interest in genetic studies. In this study, through screening the genome sequencing data of Pacific abalone, 32 potential population informative SNPs for China and Japan populations were found. Then 17 of them were successfully developed as SNP markers. After further evaluation, five SNPs showed significant differences in allele frequencies between the two populations. These SNPs could be used as population informative markers in the assessment of genetic structure changes in both wild and cultured Pacific abalone, and also in the studies on heterosis of this species.
资助项目	National High-Tech R&D Program (863 Program)[2012AA10A402]
WOS研究方向	Biodiversity & Conservation ; Genetics & Heredity
语种	英语
出版者	SPRINGER
WOS记录号	WOS:000365420200013
内容类型	期刊论文
源URL	[http://ir.fio.com.cn/handle/2SI8HI0U/3577]
专题	业务部门_海洋生态研究中心
作者单位	1.Ocean Univ China, Coll Marine Life Sci, Minist Educ, Key Lab Marine Genet & Breeding MGB, Qingdao 266003, Peoples R China; 2.State Ocean Adm, Inst Oceanog 1, Qingdao 266061, Peoples R China
推荐引用方式 GB/T 7714	Yu, Qian,Li, Yangping,Xing, Qiang,et al. Identification of SNPs with different allele frequencies in China and Japan population of Pacific abalone (Haliotis discus hannai)[J]. CONSERVATION GENETICS RESOURCES,2015,7(4):837-840.
APA	Yu, Qian.,Li, Yangping.,Xing, Qiang.,Hao, Linhua.,Li, Xue.,...&Bao, Zhenmin.(2015).Identification of SNPs with different allele frequencies in China and Japan population of Pacific abalone (Haliotis discus hannai).CONSERVATION GENETICS RESOURCES,7(4),837-840.
MLA	Yu, Qian,et al."Identification of SNPs with different allele frequencies in China and Japan population of Pacific abalone (Haliotis discus hannai)".CONSERVATION GENETICS RESOURCES 7.4(2015):837-840.