Genome-wide identification of 99 autophagy-related (Atg) genes in the monogonont rotifer Brachionus spp. and transcriptional modulation in response to cadmium

doi:10.1016/j.aquatox.2018.05.021

CORC > 水生生物研究所 > 中科院水生所知识产出（2009年前） > 水环境工程研究中心 > 期刊论文

	Genome-wide identification of 99 autophagy-related (Atg) genes in the monogonont rotifer Brachionus spp. and transcriptional modulation in response to cadmium
	Kang, Hye-Min 1; Lee, Jin-Sol 1; Kim, Min-Sub 1; Lee, Young Hwan 1; Jung, Jee-Hyun 2; Hagiwara, Atsushi 3,4; Zhou, Bingsheng 5; Lee, Jae-Seong 1; Jeong, Chang-Bum 1
刊名	AQUATIC TOXICOLOGY
	2018-08-01
卷号	201 期号:1 页码:73-82
关键词	Autophagy Autophagy-related genes Atg Rotifer Brachionus spp.
ISSN号	0166-445X
DOI	10.1016/j.aquatox.2018.05.021
英文摘要	Autophagy originated from the common ancestor of all life forms, and its function is highly conserved from yeast to humans. Autophagy plays a key role in various fundamental biological processes including defense, and has developed through serial interactions of multiple gene sets referred to as autophagy-related (Atg) genes. Despite their significance in metazoan life and evolution, few studies have been conducted to identify these genes in aquatic invertebrates. In this study, we identified whole Atg genes in four Brachionus rotifer spp., namely B. calycifiorus, B. koreanus, B. plicatilis, and B. rotundiformis, through searches of their entire genomes; and we annotated them according to the yeast nomenclature. Twenty-four genes orthologous to yeast genes were present in all of the Brachionus spp. while three additional gene duplicates were identified in the genome of B. koreanus, indicating that these genes had diversified during the speciation. Also, their transcriptional responses to cadmium exposure indicated regulation by cadmium-induced oxidative-stress related signaling pathways. This study provides valuable information on 99 conserved Atg genes involved in autophagosome formation in Brachionus spp., with transcriptional modulation in response to cadmium, in the context of the role of autophagy in the damage response.
资助项目	National Research Foundation[2017R1D1A1B03032814] ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique[PE99624]
WOS关键词	CELL-DEATH ; SACCHAROMYCES-CEREVISIAE ; MEDIATED AUTOPHAGY ; OXIDATIVE STRESS ; MODEL SELECTION ; COMPLEX ; PROTEIN ; EXPRESSION ; KOREANUS ; PATHWAY
WOS研究方向	Marine & Freshwater Biology ; Toxicology
语种	英语
出版者	ELSEVIER SCIENCE BV
WOS记录号	WOS:000440530000009
资助机构	National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; National Research Foundation ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique ; grant of Development of risk assessment for control technology to reduce transfer of ship's biofouling: In-water cleaning technique
内容类型	期刊论文
源URL	[http://ir.ihb.ac.cn/handle/342005/30552]
专题	水生生物研究所_水环境工程研究中心_期刊论文
通讯作者	Lee, Jae-Seong; Jeong, Chang-Bum
作者单位	1.Sungkyunkwan Univ, Coll Sci, Dept Biol Sci, Suwon 16419, South Korea 2.Korea Inst Ocean Sci & Technol, Oil & POPs Res Grp, Geoje 53201, South Korea 3.Nagasaki Univ, Grad Sch Fisheries & Environm Sci, Nagasaki 8528521, Japan 4.Nagasaki Univ, Org Marine Sci & Technol, Nagasaki 8528521, Japan 5.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Hubei, Peoples R China
推荐引用方式 GB/T 7714	Kang, Hye-Min,Lee, Jin-Sol,Kim, Min-Sub,et al. Genome-wide identification of 99 autophagy-related (Atg) genes in the monogonont rotifer Brachionus spp. and transcriptional modulation in response to cadmium[J]. AQUATIC TOXICOLOGY,2018,201(1):73-82.
APA	Kang, Hye-Min.,Lee, Jin-Sol.,Kim, Min-Sub.,Lee, Young Hwan.,Jung, Jee-Hyun.,...&Jeong, Chang-Bum.(2018).Genome-wide identification of 99 autophagy-related (Atg) genes in the monogonont rotifer Brachionus spp. and transcriptional modulation in response to cadmium.AQUATIC TOXICOLOGY,201(1),73-82.
MLA	Kang, Hye-Min,et al."Genome-wide identification of 99 autophagy-related (Atg) genes in the monogonont rotifer Brachionus spp. and transcriptional modulation in response to cadmium".AQUATIC TOXICOLOGY 201.1(2018):73-82.