Constructing high-density hotspots is of crucial importance in surface enhanced Raman scattering (SERS). In this paper, we present a large-area and broadband porous Au-Ag hybrid nanoparticle array which was fabricated by an ultra-thin alumina mask (UTAM) technique incorporated with annealing and galvanic replacement techniques. Experimental results and numerical simulations demonstrated that the porous Au-Ag hybrid nanoparticle array possessed enormous hotspots for high sensitivity, uniformity, and stability in SERS analysis. A large Raman enhancement factor of 2.2 × 107 was achieved with a relative standard deviation (RSD) of 7.7%, leading to excellent reliability for Raman detection. Furthermore, this novel substrate exhibited a long shelf time in an ambient environment and promising practical applications in many SERS-based quantitative analytical and biomedical sensing techniques. © 2019 The Royal Society of Chemistry.