Photoregulating rna digestion using azobenzene linked dumbbell antisense oligodeoxynucleotides | |
Wu, Li1,2; He, Yujian1,2; Tang, Xinjing2 | |
刊名 | Bioconjugate chemistry |
2015-06-01 | |
卷号 | 26期号:6页码:1070-1079 |
ISSN号 | 1043-1802 |
DOI | 10.1021/acs.bioconjchem.5b00125 |
通讯作者 | He, yujian(heyujian@ucas.ac.cn) |
英文摘要 | Introduction of 4,4'-bis(hydroxymethyl)-azobenzene (azo) to dumbbell hairpin oligonucleotides at the loop position was able to reversibly control the stability of the whole hairpin structure via uv or visible light irradiation. here, we designed and synthesized a series of azobenzene linked dumbbell antisense oligodeoxynucleotides (asodns) containing two terminal hairpins that are composed of an asodn and a short inhibitory sense strand. thermal melting studies of these azobenzene linked dumbbell asodns indicated that efficient trans to cis photoisomerization of azobenzene moieties induced large difference in thermal stability (delta t-m, = 12.1-21.3 degrees c). in addition, photomodulation of their rna binding abilities and rna digestion by rnase h was investigated. the trans-azobenzene linked asodns with the optimized base pairs between asodn strands and inhibitory sense strands could only bind few percentage of the target rna, while it was able to recover their binding to the target rna and degrade it by rnase h after light irradiation. upon optimization, it is promising to use these azobenzene linked asodns for reversible spatial and temporal regulation of antisense activities based on both steric binding and rna digestion by rnase h. |
WOS关键词 | HUMAN LEUKEMIA-CELLS ; GENE-EXPRESSION ; REVERSIBLE PHOTOREGULATION ; CAGED SIRNAS ; DNA ; LIGHT ; OLIGONUCLEOTIDES ; HYBRIDIZATION ; ACTIVATION ; NUCLEOSIDE |
WOS研究方向 | Biochemistry & Molecular Biology ; Chemistry |
WOS类目 | Biochemical Research Methods ; Biochemistry & Molecular Biology ; Chemistry, Multidisciplinary ; Chemistry, Organic |
语种 | 英语 |
出版者 | AMER CHEMICAL SOC |
WOS记录号 | WOS:000356754400014 |
内容类型 | 期刊论文 |
URI标识 | http://www.corc.org.cn/handle/1471x/2376393 |
专题 | 中国科学院大学 |
通讯作者 | He, Yujian |
作者单位 | 1.Univ Chinese Acad Sci, Sch Chem & Chem Engn, Beijing 100049, Peoples R China 2.Peking Univ, Sch Pharmaceut Sci, State Key Lab Nat & Biomimet Drugs, Beijing 100191, Peoples R China |
推荐引用方式 GB/T 7714 | Wu, Li,He, Yujian,Tang, Xinjing. Photoregulating rna digestion using azobenzene linked dumbbell antisense oligodeoxynucleotides[J]. Bioconjugate chemistry,2015,26(6):1070-1079. |
APA | Wu, Li,He, Yujian,&Tang, Xinjing.(2015).Photoregulating rna digestion using azobenzene linked dumbbell antisense oligodeoxynucleotides.Bioconjugate chemistry,26(6),1070-1079. |
MLA | Wu, Li,et al."Photoregulating rna digestion using azobenzene linked dumbbell antisense oligodeoxynucleotides".Bioconjugate chemistry 26.6(2015):1070-1079. |
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