Complete chloroplast genome of Firmiana major (Malvaceae), a critically endangered species endemic to southwest China

CORC > 昆明植物研究所 > 中国科学院昆明植物研究所 > 中国西南野生生物种质资源库

	Complete chloroplast genome of Firmiana major (Malvaceae), a critically endangered species endemic to southwest China
	Ya, Ji-Dong 1; Yu, Zhi-Xiang 2; Yang, Yan-Qiong 2; Zhang, Shu-Dong 1; Zhang, Zhi-Rong1 ; Cai, Jie 1; Yang, Jun-Bo 1; Yu, Wen-Bin 3,4
刊名	CONSERVATION GENETICS RESOURCES
	2018-12-01
卷号	10 期号:4 页码:713-715
关键词	Firmiana major Plastid genome Malvaceae IUCN Endangered species
ISSN号	1877-7252
英文摘要	Firmiana major is an endangered species in southwest China, which had been considered as extinct in the wild on the IUCN Red List of Threatened Species in 1998. Fortunately, around 2000 wild individuals were rediscovered along the valley of Jinshajiang river in south Sichuan and north Yunnan. In this study, we reported a complete chloroplast genome of F. major, which was de novo assembled using the next-generation sequencing data. The plastome was 161,302 bp in length, consisting of a pair of inverted repeat (25,543 bp for each), one large single copy (90,178 bp) and one small single copy (20,038 bp) regions. The whole genome contained 132 genes, including 87 protein-coding, 37 tRNA and 8 rRNA genes. The overall GC content of the whole genome was 36.9%. Maximum likelihood analysis showed that F. major was sister to Tilia spp.
资助项目	Germplasm Bank of Wild Species in Southwest China ; National Key Basic Research Program of China[2014CB954100] ; Major International Joint Research Project of National Natural Science Foundation of China[31320103919] ; China Council Scholarship ; Chinese Academy of Sciences
语种	英语
资助机构	Germplasm Bank of Wild Species in Southwest China ; National Key Basic Research Program of China ; Major International Joint Research Project of National Natural Science Foundation of China ; China Council Scholarship ; Chinese Academy of Sciences
内容类型	期刊论文
源URL	[http://ir.kib.ac.cn/handle/151853/64406]
专题	昆明植物研究所_中国西南野生生物种质资源库
通讯作者	Yu, Wen-Bin
作者单位	1.Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Yunnan, Peoples R China 2.Natl Nat Reserve Panzhihua Cycad Sichuan Prov, Panzhihua 617000, Sichuan, Peoples R China 3.Ctr Integrat Conservat, Xishuangbanna Trop Bot Garden, Mengla 666303, Yunnan, Peoples R China 4.Chinese Acad Sci, Southeast Asia Biodivers Res Inst, Yezin 05282, Nay Pyi Taw, Myanmar
推荐引用方式 GB/T 7714	Ya, Ji-Dong,Yu, Zhi-Xiang,Yang, Yan-Qiong,et al. Complete chloroplast genome of Firmiana major (Malvaceae), a critically endangered species endemic to southwest China[J]. CONSERVATION GENETICS RESOURCES,2018,10(4):713-715.
APA	Ya, Ji-Dong.,Yu, Zhi-Xiang.,Yang, Yan-Qiong.,Zhang, Shu-Dong.,Zhang, Zhi-Rong.,...&Yu, Wen-Bin.(2018).Complete chloroplast genome of Firmiana major (Malvaceae), a critically endangered species endemic to southwest China.CONSERVATION GENETICS RESOURCES,10(4),713-715.
MLA	Ya, Ji-Dong,et al."Complete chloroplast genome of Firmiana major (Malvaceae), a critically endangered species endemic to southwest China".CONSERVATION GENETICS RESOURCES 10.4(2018):713-715.