SNP-revealed genetic diversity in wild emmer wheat correlates with ecological factors

CORC > 武汉植物园 > 中国科学院武汉植物园

	SNP-revealed genetic diversity in wild emmer wheat correlates with ecological factors
	Ren, Jing; Chen, Liang; Sun, Daokun; You, Frank M.; Wang, Jirui; Peng, Yunliang; Nevo, Eviatar; Beiles, Avigdor; Sun, Dongfa; Luo, Ming-Cheng
刊名	BMC EVOLUTIONARY BIOLOGY
	2013
英文摘要	Background: Patterns of genetic diversity between and within natural plant populations and their driving forces are of great interest in evolutionary biology. However, few studies have been performed on the genetic structure and population divergence in wild emmer wheat using a large number of EST-related single nucleotide polymorphism (SNP) markers. Results: In the present study, twenty-five natural wild emmer wheat populations representing a wide range of ecological conditions in Israel and Turkey were used. Genetic diversity and genetic structure were investigated using over 1,000 SNP markers. A moderate level of genetic diversity was detected due to the biallelic property of SNP markers. Clustering based on Bayesian model showed that grouping pattern is related to the geographical distribution of the wild emmer wheat. However, genetic differentiation between populations was not necessarily dependent on the geographical distances. A total of 33 outlier loci under positive selection were identified using a FST-outlier method. Significant correlations between loci and ecogeographical factors were observed. Conclusions: Natural selection appears to play a major role in generating adaptive structures in wild emmer wheat. SNP markers are appropriate for detecting selectively-channeled adaptive genetic diversity in natural populations of wild emmer wheat. This adaptive genetic diversity is significantly associated with ecological factors.
内容类型	期刊论文
源URL	[http://202.127.146.157/handle/2RYDP1HH/580]
专题	中国科学院武汉植物园
推荐引用方式 GB/T 7714	Ren, Jing,Chen, Liang,Sun, Daokun,et al. SNP-revealed genetic diversity in wild emmer wheat correlates with ecological factors[J]. BMC EVOLUTIONARY BIOLOGY,2013.
APA	Ren, Jing.,Chen, Liang.,Sun, Daokun.,You, Frank M..,Wang, Jirui.,...&Peng, Junhua.(2013).SNP-revealed genetic diversity in wild emmer wheat correlates with ecological factors.BMC EVOLUTIONARY BIOLOGY.
MLA	Ren, Jing,et al."SNP-revealed genetic diversity in wild emmer wheat correlates with ecological factors".BMC EVOLUTIONARY BIOLOGY (2013).