Molecular phylogeny of coronaviruses including human SARS-CoV

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	Molecular phylogeny of coronaviruses including human SARS-CoV
	Gao, L; Qi, J; Wei, HB; Sun, YG; Hao, BL; Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China.
刊名	CHINESE SCIENCE BULLETIN
	2003
卷号	48 期号:12 页码:1170-1174
关键词	Acute Respiratory Syndrome Sequence
ISSN号	1001-6538
英文摘要	Phylogenetic tree of coronaviruses (CoVs) including the human SARS-associated virus is reconstructed from complete genomes by using our newly developed K-string composition approach. The relation of the human SARS-CoV to other coronaviruses, i.e. the rooting of the tree is suggested by choosing an appropriate outgroup. SARS-CoV makes a separate group closer but still distant from G2 (CoVs in mammalian host). The relation between different isolates of the human SARS virus is inferred by first constructing an ultrametric distance matrix from counting sequence variations in the genomes. The resulting tree is consistent with clinic relations between the SARS-CoV isolates. In addition to a larger variety of coronavirus genomes these results provide phylogenetic knowledge based on independent novel methodology as compared to recent phylogenetic studies on SARS-CoV.
学科主题	Physics
URL标识	查看原文
WOS记录号	WOS:000184249300002
公开日期	2012-08-29
内容类型	期刊论文
源URL	[http://ir.itp.ac.cn/handle/311006/13280]
专题	理论物理研究所_理论物理所1978-2010年知识产出
通讯作者	Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China.
推荐引用方式 GB/T 7714	Gao, L,Qi, J,Wei, HB,et al. Molecular phylogeny of coronaviruses including human SARS-CoV[J]. CHINESE SCIENCE BULLETIN,2003,48(12):1170-1174.
APA	Gao, L,Qi, J,Wei, HB,Sun, YG,Hao, BL,&Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China..(2003).Molecular phylogeny of coronaviruses including human SARS-CoV.CHINESE SCIENCE BULLETIN,48(12),1170-1174.
MLA	Gao, L,et al."Molecular phylogeny of coronaviruses including human SARS-CoV".CHINESE SCIENCE BULLETIN 48.12(2003):1170-1174.