Identification of Soybean MicroRNAs Involved in Soybean Cyst Nematode Infection by Deep Sequencing

doi:10.1371/journal.pone.0039650

CORC > 中国农业科学院 > 作物科学研究所

	Identification of Soybean MicroRNAs Involved in Soybean Cyst Nematode Infection by Deep Sequencing
	Li, Xiaoyan 1,2; Wang, Xue 3; Zhang, Shaopeng 1,2; Liu, Dawei 3; Duan, Yuxi 3; Dong, Wei 4
刊名	PLOS ONE
	2012
卷号	7 期号:6 页码:-
ISSN号	1932-6203
DOI	10.1371/journal.pone.0039650
通讯作者	Li, Xiaoyan
英文摘要	Soybean cyst nematode (SCN), Heterodera glycines, is the most devastating pathogen of soybean worldwide. MicroRNAs (miRNAs) are a class of small, non-coding RNAs that are known to play important role in plant stress response. However, there are few reports profiling the miRNA expression patterns during pathogen stress. We sequenced four small RNA libraries from two soybean cultivar (Hairbin xiaoheidou, SCN race 3 resistant, Liaodou 10, SCN race 3 susceptible) that grown under un-inoculated and SCN-inoculated soil. Small RNAs were mapped to soybean genome sequence, 364 known soybean miRNA genes were identified in total. In addition, 21 potential miRNA candidates were identified. Comparative analysis of miRNA profiling indicated 101 miRNAs belong to 40 families were SCN-responsive. We also found 20 miRNAs with different express pattern even between two cultivars of the same species. These findings suggest that miRNA paly important role in soybean response to SCN and have important implications for further identification of miRNAs under pathogen stress.
学科主题	Multidisciplinary Sciences ; MULTIDISCIPLINARY SCIENCES
语种	英语
出版者	PUBLIC LIBRARY SCIENCE
WOS记录号	WOS:000305825800056
内容类型	期刊论文
源URL	[http://111.203.20.206/handle/2HMLN22E/5152]
专题	作物科学研究所
作者单位	1.Chinese Acad Sci, Beijing Inst Genom, Beijing, Peoples R China 2.Chinese Acad Sci, Grad Univ, Beijing, Peoples R China 3.Shenyang Agr Univ, Nematol Inst No China, Shenyang, Peoples R China 4.Beijing Genom Inst, Hangzhou, Zhejiang, Peoples R China
推荐引用方式 GB/T 7714	Li, Xiaoyan,Wang, Xue,Zhang, Shaopeng,et al. Identification of Soybean MicroRNAs Involved in Soybean Cyst Nematode Infection by Deep Sequencing[J]. PLOS ONE,2012,7(6):-.
APA	Li, Xiaoyan,Wang, Xue,Zhang, Shaopeng,Liu, Dawei,Duan, Yuxi,&Dong, Wei.(2012).Identification of Soybean MicroRNAs Involved in Soybean Cyst Nematode Infection by Deep Sequencing.PLOS ONE,7(6),-.
MLA	Li, Xiaoyan,et al."Identification of Soybean MicroRNAs Involved in Soybean Cyst Nematode Infection by Deep Sequencing".PLOS ONE 7.6(2012):-.