Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean

	Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean
	Zhou ZK 1; Jiang Y 2,3; Gou ZH 2,4; Lyu J 2; Li WY 1; Yu YJ 5; Shu LP 2; Zhao YJ 2,4; Ma YM 1; Fang C 1,4
刊名	NATURE BIOTECHNOLOGY
	2015
卷号	33 期号:4 页码:408-414
通讯作者	wwang@mail.kiz.ac.cn ; zxtian@genetics.ac.cn
合作状况	其它
英文摘要	Understanding soybean (Glycine max) domestication and improvement at a genetic level is important to inform future efforts to further improve a crop that provides the world's main source of oilseed. We detect 230 selective sweeps and 162 selected copy number variants by analysis of 302 resequenced wild, landrace and improved soybean accessions at > 11x depth. A genomewide association study using these new sequences reveals associations between 10 selected regions and 9 domestication or improvement traits, and identifies 13 previously uncharacterized loci for agronomic traits including oil content, plant height and pubescence form. Combined with previous quantitative trait loci (QTL) information, we find that, of the 230 selected regions, 96 correlate with reported oil QTLs and 21 contain fatty acid biosynthesis genes. Moreover, we observe that some traits and loci are associated with geographical regions, which shows that soybean populations are structured geographically. This study provides resources for genomics-enabled improvements in soybean breeding.
收录类别	SCI
资助信息	This work was supported by the National Key Basic Research Program (No. 2013CB835200), National Natural Science Foundation of China (grant no. 31222042), “Strategic Priority Research Program” of the Chinese Academy of Sciences (grant no. XDA08020202), and “One-hundred talents” Startup Funds from Chinese Academy of Sciences for Z.T.
语种	英语
WOS记录号	WOS:000352348500028
公开日期	2015-05-08
内容类型	期刊论文
源URL	[http://159.226.149.42:8088/handle/152453/8319]
专题	昆明动物研究所_基因起源组昆明动物研究所_遗传资源与进化国家重点实验室
作者单位	1.State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China 2.State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China 3.College of Animal Science and Technology, Northwest A&F University, Yangling, China 4.University of Chinese Academy of Sciences, Beijing, China 5.Institute of Microbiology, Chinese Academy of Sciences, Beijing, China 6.Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, Korea
推荐引用方式 GB/T 7714	Zhou ZK,Jiang Y,Gou ZH,et al. Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean[J]. NATURE BIOTECHNOLOGY,2015,33(4):408-414.
APA	Zhou ZK.,Jiang Y.,Gou ZH.,Lyu J.,Li WY.,...&Wang W[*].(2015).Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean.NATURE BIOTECHNOLOGY,33(4),408-414.
MLA	Zhou ZK,et al."Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean".NATURE BIOTECHNOLOGY 33.4(2015):408-414.