Middle-Upper Pleistocene climate changes shaped the divergence and demography of Cycas guizhouensis (Cycadaceae): Evidence from DNA sequences and microsatellite markers

CORC > 昆明植物研究所 > 中国科学院昆明植物研究所 > 中国科学院东亚植物多样性与生物地理学重点实验室

	Middle-Upper Pleistocene climate changes shaped the divergence and demography of Cycas guizhouensis (Cycadaceae): Evidence from DNA sequences and microsatellite markers
	Feng, Xiuyan 1,2; Zheng, Ying 1,2; Gong, Xun1
刊名	SCIENTIFIC REPORTS
	2016-06-07
卷号	6
英文摘要	Climatic oscillations in the Pleistocene have had profound effects on the demography and genetic diversity of many extant species. Cycas guizhouensis Lan & R.F. Zou is an endemic and endangered species in Southwest China that is primarily distributed along the valleys of the Nanpan River. In this study, we used four chloroplast DNAs (cpDNA), three nuclear genes (nDNA) and 13 microsatellite (SSR) loci to investigate the genetic structure, divergence time and demographic history of 11 populations of C. guizhouensis. High genetic diversity and high levels of genetic differentiation among the populations were observed. Two evolutionary units were revealed based on network and Structure analysis. The divergence time estimations suggested that haplotypes of C. guizhouensis were diverged during the Middle-Upper Pleistocene. Additionally, the demographic histories deduced from different DNA sequences were discordant, but overall indicated that C. guizhouensis had experienced a recent population expansion during the post-glacial period. Microsatellite data revealed that there was a contraction in effective population size in the past. These genetic features allow conservation measures to be taken to ensure the protection of this endangered species from extinction.
类目[WOS]	Multidisciplinary Sciences
研究领域[WOS]	Science & Technology - Other Topics
关键词[WOS]	EFFECTIVE POPULATION-SIZE ; ALLELE FREQUENCY DATA ; LIFE-HISTORY TRAITS ; GENETIC-STRUCTURE ; HAPLOTYPE RECONSTRUCTION ; EST-MICROSATELLITES ; PLANT-POPULATIONS ; CHLOROPLAST DNA ; GENOTYPE DATA ; SSR MARKERS
收录类别	SCI
语种	英语
WOS记录号	WOS:000377174300001
内容类型	期刊论文
源URL	[http://ir.kib.ac.cn/handle/151853/26261]
专题	昆明植物研究所_中国科学院东亚植物多样性与生物地理学重点实验室
作者单位	1.Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Div & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
推荐引用方式 GB/T 7714	Feng, Xiuyan,Zheng, Ying,Gong, Xun. Middle-Upper Pleistocene climate changes shaped the divergence and demography of Cycas guizhouensis (Cycadaceae): Evidence from DNA sequences and microsatellite markers[J]. SCIENTIFIC REPORTS,2016,6.
APA	Feng, Xiuyan,Zheng, Ying,&Gong, Xun.(2016).Middle-Upper Pleistocene climate changes shaped the divergence and demography of Cycas guizhouensis (Cycadaceae): Evidence from DNA sequences and microsatellite markers.SCIENTIFIC REPORTS,6.
MLA	Feng, Xiuyan,et al."Middle-Upper Pleistocene climate changes shaped the divergence and demography of Cycas guizhouensis (Cycadaceae): Evidence from DNA sequences and microsatellite markers".SCIENTIFIC REPORTS 6(2016).